Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pspCCOG1983 Putative stress-responsive transcriptional regulator. (127 aa)    
Predicted Functional Partners:
EAQ32039.1
Phage shock protein B; COG0419 ATPase involved in DNA repair.
 
 
 0.999
pspA
COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
 
 
 0.999
EAQ30851.1
COG2198 FOG: HPt domain.
  
 
 0.927
EAQ32037.1
COG3106 Predicted ATPase.
     
 0.850
EAQ32036.1
COG3768 Predicted membrane protein.
     
 0.836
EAQ30963.1
COG0591 Na+/proline symporter.
  
 
 0.819
EAQ33057.1
PAS domain-containing protein; COG0591 Na+/proline symporter.
  
 
 0.819
EAQ32499.1
Hybrid sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 
 0.815
pspF
Transcriptional regulator, AtoC family (AAA,HTH domains); COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain.
 
   
 0.736
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
   
   0.702
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.