Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ32042.1COG0747 ABC-type dipeptide transport system, periplasmic component. (540 aa)    
Predicted Functional Partners:
EAQ32043.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.999
EAQ32044.1
COG4171 ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.992
EAQ32045.1
COG4170 ABC-type antimicrobial peptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
 0.981
EAQ32046.1
COG4167 ABC-type antimicrobial peptide transport system, ATPase component.
 
   
 0.966
pspF
Transcriptional regulator, AtoC family (AAA,HTH domains); COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain.
    
  0.843
EAQ32047.1
COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.755
EAQ32039.1
Phage shock protein B; COG0419 ATPase involved in DNA repair.
 
     0.676
pspA
COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
 
     0.656
pspC
COG1983 Putative stress-responsive transcriptional regulator.
 
     0.630
EAQ32037.1
COG3106 Predicted ATPase.
 
     0.618
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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