STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32064.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
EAQ32063.1
COG0730 Predicted permeases.
       0.773
EAQ32065.1
COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
       0.594
EAQ32056.1
COG1238 Predicted membrane protein.
       0.553
pcm
Protein-L-isoaspartate carboxylmethyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
       0.553
surE
SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.553
truD
Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
       0.553
EAQ32060.1
COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
       0.553
EAQ32061.1
COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase.
       0.553
EAQ32062.1
COG2919 Septum formation initiator.
       0.553
EAQ32055.1
Lipoprotein NlpD; COG0739 Membrane proteins related to metalloendopeptidases.
       0.538
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.