Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
recORecombinational DNA repair protein, RecO, RecF pathway; Involved in DNA repair and RecF pathway recombination. (228 aa)    
Predicted Functional Partners:
recR
Recombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
 
 
 0.935
EAQ31154.1
Pyridoxal phosphate biosynthetic protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
     
 0.916
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.913
rnc
COG0571 dsRNA-specific ribonuclease.
  
  
 0.897
EAQ31152.1
COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase.
 
   
 0.857
EAQ31153.1
COG0736 Phosphopantetheinyl transferase (holo-ACP synthase).
     
 0.854
EAQ31145.1
COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase.
  
  
 0.841
EAQ31158.1
COG0681 Signal peptidase I.
  
  
 0.839
relA
(p)ppGpp synthetase II; COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases.
     
 0.830
EAQ31150.1
COG1694 Predicted pyrophosphatase.
       0.820
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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