STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31175.1COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. (320 aa)    
Predicted Functional Partners:
EAQ33352.1
Fatty acid oxidation complex alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.636
EAQ31192.1
Fatty oxidation complex, alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.636
EAQ31678.1
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
    
 0.628
EAQ31176.1
Response regulator with TPR repeat; COG0784 FOG: CheY-like receiver.
       0.543
EAQ33061.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
  0.471
EAQ31493.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
  0.471
EAQ31963.1
4-coumarate-CoA ligase, putative; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
    
  0.470
EAQ31460.1
Histone deacetylase/AcuC/AphA family protein; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
  
 
   0.464
EAQ32442.1
COG2130 Putative NADP-dependent oxidoreductases.
 
 
0.463
xerD
Site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
    
  0.457
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.