Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32306.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
EAQ32305.1
Type I restriction-modification system, S subunit, EcoA family protein; COG0732 Restriction endonuclease S subunits.
       0.704
EAQ32304.1
COG0286 Type I restriction-modification system methyltransferase subunit.
       0.701
EAQ32303.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
       0.620
EAQ32307.1
COG4823 Abortive infection bacteriophage resistance protein.
       0.514
EAQ33308.1
Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism.
  
     0.461
EAQ33307.1
COG0582 Integrase.
  
     0.445
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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