STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32325.1Hypothetical protein; COG1196 Chromosome segregation ATPases. (297 aa)    
Predicted Functional Partners:
EAQ32326.1
Hypothetical protein.
       0.856
EAQ32327.1
RNA polymerase sigma factor, sigma-70 family protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.856
EAQ30851.1
COG2198 FOG: HPt domain.
    
  0.849
EAQ30963.1
COG0591 Na+/proline symporter.
    
  0.848
EAQ32499.1
Hybrid sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
    
  0.848
EAQ33057.1
PAS domain-containing protein; COG0591 Na+/proline symporter.
    
  0.848
EAQ31823.1
COG0835 Chemotaxis signal transduction protein.
    
  0.806
EAQ33244.1
Putative two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
    
  0.784
EAQ31817.1
Sensory box protein/GGDEF domain protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
    
  0.784
EAQ33224.1
Intracellular signaling protein (GAF,GGDEF,EAL domains); COG2199 FOG: GGDEF domain.
    
  0.754
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.