STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32354.1COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. (254 aa)    
Predicted Functional Partners:
apaG
COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport.
  
  
 0.938
EAQ31987.1
Putative protein phosphatase with Diacylglycerol kinase domain; COG0671 Membrane-associated phospholipid phosphatase.
    
 0.868
EAQ31989.1
COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
    
  0.862
EAQ32214.1
WD40 repeats containg secreted protein; COG2319 FOG: WD40 repeat.
   
 0.862
surA
Periplasmic parvulin-like peptidyl-prolyl isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
 
 
 
 0.837
EAQ32213.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
    
 0.834
rapA
Probable ATP-dependent RNA helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
    
 0.811
EAQ32951.1
Uncharacterized conserved membrane protein.
    
  0.803
EAQ32289.1
Hypothetical protein.
    
  0.803
ksgA
COG0030 Dimethyladenosine transferase (rRNA methylation); Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.797
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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