STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erpAHesB/IscA family protein; Required for insertion of 4Fe-4S clusters for at least IspG. (114 aa)    
Predicted Functional Partners:
EAQ33251.1
Fe-S cluster assembly scaffold protein.
 
    0.780
EAQ31166.1
Predicted aminomethyltransferase, GcvT family protein; COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family.
 
 
 0.721
nfuA
Hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.694
EAQ32361.1
Uncharacterized conserved membrane or secreted protein; COG0840 Methyl-accepting chemotaxis protein.
  
    0.657
djlA
Dna-J like membrane chaperone protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.
  
 
 0.635
pepQ
Xaa-Pro aminopeptidase; Splits dipeptides with a prolyl residue in the C-terminal position.
       0.593
EAQ31428.1
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
 
  
 0.567
dnaK
COG0443 Molecular chaperone.
 
 
 0.560
EAQ33249.1
Cysteine desulfurase activator SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
  
 
 0.558
EAQ31081.1
NifS; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
  
 0.558
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.