STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32376.1COG0076 Glutamate decarboxylase and related PLP-dependent proteins. (559 aa)    
Predicted Functional Partners:
EAQ32375.1
COG0414 Panthothenate synthetase.
  
 
  0.939
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.939
EAQ31288.1
COG1012 NAD-dependent aldehyde dehydrogenases.
    
 0.919
EAQ31509.1
N-carbamoyl-L-amino acid amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
     
 0.905
tyrA
COG1605 Chorismate mutase.
    
 0.897
EAQ30865.1
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.881
EAQ33002.1
COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.
     
 0.877
EAQ32379.1
COG1131 ABC-type multidrug transport system, ATPase component.
   
 
 0.846
EAQ32380.1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase.
  
    0.846
EAQ32377.1
COG0220 Predicted S-adenosylmethionine-dependent methyltransferase.
       0.834
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.