STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32377.1COG0220 Predicted S-adenosylmethionine-dependent methyltransferase. (234 aa)    
Predicted Functional Partners:
EAQ32376.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
       0.856
EAQ32378.1
COG0842 ABC-type multidrug transport system, permease component.
       0.856
EAQ32379.1
COG1131 ABC-type multidrug transport system, ATPase component.
       0.851
EAQ32381.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelateligase; COG0773 UDP-N-acetylmuramate-alanine ligase.
       0.821
EAQ32380.1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase.
       0.809
fbp
COG0158 Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
       0.648
truB
tRNA pseudouridine 5S synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
 
 0.640
EAQ32161.1
Hypothetical protein.
  
     0.597
EAQ30924.1
Uncharacterized conserved membrane protein.
  
     0.591
EAQ31241.1
COG3198 Uncharacterized protein conserved in bacteria.
  
     0.579
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.