STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32379.1COG1131 ABC-type multidrug transport system, ATPase component. (311 aa)    
Predicted Functional Partners:
EAQ32378.1
COG0842 ABC-type multidrug transport system, permease component.
 
 0.989
EAQ32376.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
   
 
 0.846
EAQ32377.1
COG0220 Predicted S-adenosylmethionine-dependent methyltransferase.
       0.834
EAQ32380.1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase.
       0.834
EAQ32381.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelateligase; COG0773 UDP-N-acetylmuramate-alanine ligase.
       0.788
atpC
F0F1-type ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.705
atpD
COG0055 F0F1-type ATP synthase, beta subunit.
    
   0.683
EAQ32762.1
COG0842 ABC-type multidrug transport system, permease component.
  
 
 0.629
fbp
COG0158 Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
  
    0.629
EAQ30838.1
COG1668 ABC-type Na+ efflux pump, permease component.
  
 
 0.609
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.