STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32384.1COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (235 aa)    
Predicted Functional Partners:
EAQ32385.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  0.987
EAQ32386.1
COG3495 Uncharacterized protein conserved in bacteria.
 
  
 0.963
EAQ32716.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 0.904
EAQ32718.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 0.904
EAQ32984.1
ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 0.870
lolA
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.850
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.825
EAQ32074.1
COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis.
    
 
 0.731
EAQ32983.1
ABC transporter ATP-binding protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
  0.717
EAQ31055.1
Gliding motility protein (gldA) related protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
     0.712
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.