STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32385.1COG0577 ABC-type antimicrobial peptide transport system, permease component. (417 aa)    
Predicted Functional Partners:
EAQ32384.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.992
EAQ32386.1
COG3495 Uncharacterized protein conserved in bacteria.
 
     0.966
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.809
lolD
ABC-type transport system, involved in lipoprotein release, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
 0.805
EAQ32982.1
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 0.803
fbp
COG0158 Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
  
    0.619
EAQ32412.1
Uncharacterized conserved secreted protein.
   
 
 0.554
lolA
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.554
EAQ32121.1
Hypothetical protein; COG0470 ATPase involved in DNA replication.
    
   0.465
EAQ32376.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
       0.461
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.