Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32387.1Signaling protein (CHEY,EAL,GGDEF domains); COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain. (738 aa)    
Predicted Functional Partners:
EAQ30851.1
COG2198 FOG: HPt domain.
  
 0.989
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
 
 0.966
EAQ32556.1
Intracellular signaling protein (PAS,GGDEF domains); COG2199 FOG: GGDEF domain.
 
 0.942
EAQ31848.1
Sensory box/GGDEF domain/EAL domain protein; COG2202 FOG: PAS/PAC domain.
 
 0.927
EAQ32237.1
Putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
0.917
EAQ33244.1
Putative two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
0.906
EAQ31817.1
Sensory box protein/GGDEF domain protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
0.895
EAQ33115.1
Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
0.862
EAQ31193.1
Signaling protein with a ligand-binding sensor domain, PAS, GGDEF andEAL domains; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
0.860
EAQ32742.1
Putative diguanylate cyclase (GGDEF); COG2199 FOG: GGDEF domain.
 
 
 0.857
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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