Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32178.1COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase. (368 aa)    
Predicted Functional Partners:
EAQ31292.1
COG1444 Predicted P-loop ATPase fused to an acetyltransferase.
   
    0.508
EAQ32177.1
tRNA (uracil-5-)-methyltransferase.
       0.507
trmB
Predicted methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.458
EAQ31495.1
COG3100 Uncharacterized protein conserved in bacteria.
  
     0.439
EAQ31301.1
COG0116 Predicted N6-adenine-specific DNA methylase.
  
  
 0.409
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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