Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32199.1COG3085 Uncharacterized protein conserved in bacteria. (121 aa)    
Predicted Functional Partners:
EAQ32504.1
COG3092 Uncharacterized protein conserved in bacteria.
  
     0.741
lptC
Uncharacterized conserved secreted protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
  
     0.713
EAQ32606.1
Acetyltransferase, GNAT family fused to PaaI related uncharacterized conserved domain; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.713
EAQ31012.1
COG3076 Uncharacterized protein conserved in bacteria.
  
     0.680
EAQ32621.1
Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis.
  
    0.639
EAQ31984.1
COG3083 Predicted hydrolase of alkaline phosphatase superfamily.
  
     0.636
EAQ32179.1
MerC-like membrane protein.
  
     0.623
EAQ30851.1
COG2198 FOG: HPt domain.
  
     0.590
EAQ31298.1
COG5563 Predicted integral membrane proteins containing uncharacterized repeats.
  
     0.584
EAQ32072.1
Hypothetical protein.
  
     0.579
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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