Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ32214.1WD40 repeats containg secreted protein; COG2319 FOG: WD40 repeat. (333 aa)    
Predicted Functional Partners:
flgM
COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
 
   0.956
EAQ31987.1
Putative protein phosphatase with Diacylglycerol kinase domain; COG0671 Membrane-associated phospholipid phosphatase.
  
 0.929
EAQ31989.1
COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
    
 0.876
EAQ31675.1
COG0013 Alanyl-tRNA synthetase.
    
 0.874
motB
COG1360 Flagellar motor protein.
 
 
 0.862
EAQ32354.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
   
 0.862
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.848
EAQ31691.1
DnaJ-related protein; COG2214 DnaJ-class molecular chaperone.
  
 
  0.845
EAQ30996.1
COG1841 Ribosomal protein L30/L7E.
   
  0.836
EAQ32215.1
COG2900 Uncharacterized protein conserved in bacteria.
       0.834
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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