EAQ32235.1 protein (Idiomarina baltica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAQ32235.1

COG0334 Glutamate dehydrogenase/leucine dehydrogenase. (450 aa)

Predicted Functional Partners:

EAQ30917.1

0.999

EAQ30865.1

0.914

EAQ30918.1

0.906

EAQ31513.1

0.902

tyrA

0.902

EAQ33002.1

0.890

EAQ32971.1

0.876

glnA

0.862

EAQ31642.1

0.833

EAQ31386.1

0.830

Your Current Organism:

Idiomarina baltica

NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ30865.1	EAQ30917.1	OS145_03322	OS145_11374	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	0.889
EAQ30865.1	EAQ30918.1	OS145_03322	OS145_11379	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.	0.882
EAQ30865.1	EAQ31386.1	OS145_03322	OS145_04675	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain.	0.860
EAQ30865.1	EAQ31513.1	OS145_03322	OS145_09510	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutamate synthase, putative; COG0069 Glutamate synthase domain 2.	0.829
EAQ30865.1	EAQ31642.1	OS145_03322	OS145_10395	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	COG0436 Aspartate/tyrosine/aromatic aminotransferase.	0.894
EAQ30865.1	EAQ32235.1	OS145_03322	OS145_08387	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	COG0334 Glutamate dehydrogenase/leucine dehydrogenase.	0.914
EAQ30865.1	EAQ32971.1	OS145_03322	OS145_04053	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	COG0165 Argininosuccinate lyase.	0.425
EAQ30865.1	EAQ33002.1	OS145_03322	OS145_04208	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.	0.827
EAQ30865.1	glnA	OS145_03322	OS145_08988	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	COG0174 Glutamine synthetase.	0.894
EAQ30865.1	tyrA	OS145_03322	OS145_10645	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	COG1605 Chorismate mutase.	0.476
EAQ30917.1	EAQ30865.1	OS145_11374	OS145_03322	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	0.889
EAQ30917.1	EAQ30918.1	OS145_11374	OS145_11379	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.	0.999
EAQ30917.1	EAQ31386.1	OS145_11374	OS145_04675	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain.	0.918
EAQ30917.1	EAQ31513.1	OS145_11374	OS145_09510	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	Glutamate synthase, putative; COG0069 Glutamate synthase domain 2.	0.996
EAQ30917.1	EAQ31642.1	OS145_11374	OS145_10395	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	COG0436 Aspartate/tyrosine/aromatic aminotransferase.	0.946
EAQ30917.1	EAQ32235.1	OS145_11374	OS145_08387	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	COG0334 Glutamate dehydrogenase/leucine dehydrogenase.	0.999
EAQ30917.1	EAQ32971.1	OS145_11374	OS145_04053	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	COG0165 Argininosuccinate lyase.	0.759
EAQ30917.1	EAQ33002.1	OS145_11374	OS145_04208	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain.	0.925
EAQ30917.1	glnA	OS145_11374	OS145_08988	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	COG0174 Glutamine synthetase.	0.978
EAQ30917.1	tyrA	OS145_11374	OS145_10645	Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.	COG1605 Chorismate mutase.	0.510