Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32239.1COG3577 Predicted aspartyl protease. (167 aa)    
Predicted Functional Partners:
EAQ32238.1
Uncharacterized conserved secreted protein.
 
     0.836
EAQ32240.1
COG0276 Protoheme ferro-lyase (ferrochelatase).
       0.830
EAQ32241.1
COG1238 Predicted membrane protein.
       0.558
EAQ32242.1
Membrane hemolisin TlyC, contains CBS domains; COG1253 Hemolysins and related proteins containing CBS domains.
       0.545
EAQ30808.1
Na+-type flagellar protein, contains TPR repeats; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
  
  0.458
EAQ32389.1
COG5345 Uncharacterized protein conserved in bacteria.
  
     0.432
EAQ32386.1
COG3495 Uncharacterized protein conserved in bacteria.
  
     0.413
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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