Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32240.1COG0276 Protoheme ferro-lyase (ferrochelatase). (365 aa)    
Predicted Functional Partners:
hemJ
COG1981 Predicted membrane protein.
 
  
 0.968
EAQ33146.1
Protoheme IX farnesyltransferase; COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
     
 0.923
EAQ31060.1
COG2193 Bacterioferritin (cytochrome b1).
     
 0.914
EAQ31061.1
COG2193 Bacterioferritin (cytochrome b1).
     
 0.914
EAQ32210.1
COG0407 Uroporphyrinogen-III decarboxylase.
 
  
 0.896
EAQ32239.1
COG3577 Predicted aspartyl protease.
       0.830
EAQ32238.1
Uncharacterized conserved secreted protein.
       0.813
EAQ32677.1
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.741
EAQ33341.1
COG0408 Coproporphyrinogen III oxidase.
 
  
 0.714
EAQ31723.1
Uncharacterized metal-binding protein; COG0748 Putative heme iron utilization protein.
     
 0.695
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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