Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32249.1COG0510 Predicted choline kinase involved in LPS biosynthesis. (238 aa)    
Predicted Functional Partners:
EAQ32251.1
Hypothetical protein.
 
     0.842
EAQ32252.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.820
EAQ32250.1
COG3201 Nicotinamide mononucleotide transporter.
     
 0.813
EAQ32248.1
COG0477 Permeases of the major facilitator superfamily.
       0.805
thiL
Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
     
 0.670
EAQ32205.1
COG1162 Predicted GTPases.
  
  
  0.649
EAQ33064.1
Uncharacterized conserved membrane protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.627
EAQ33063.1
Uncharacterized conserved secreted protein; COG1196 Chromosome segregation ATPases.
  
     0.616
EAQ32747.1
Heme oxygenase related enzyme.
   
 
  0.509
EAQ32253.1
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
     0.505
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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