STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32253.1COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (233 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.998
carB
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
  
 0.974
pyrE
COG0461 Orotate phosphoribosyltransferase.
  
 
 0.970
EAQ31204.1
COG0505 Carbamoylphosphate synthase small subunit.
  
 
 0.969
pyrF
Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
 
 0.965
fadH
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.965
EAQ30918.1
Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.945
EAQ31227.1
Two domain protein containing GlcD-like FAD/FMN dehydrogenase and GlpC-like Fe-S oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
  
 0.917
EAQ32254.1
COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; Belongs to the UbiD family.
  
    0.917
rho
COG1158 Transcription termination factor.
       0.855
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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