STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32256.1Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. (108 aa)    
Predicted Functional Partners:
EAQ31801.1
COG0492 Thioredoxin reductase.
 0.998
EAQ31453.1
COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
 0.828
EAQ31375.1
COG0480 Translation elongation factors (GTPases).
   
 
 0.754
rho
COG1158 Transcription termination factor.
  
  
 0.700
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 
 0.646
flgK
COG1256 Flagellar hook-associated protein.
   
   0.619
rhlB
ATP-dependent RNA helicase; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.
       0.618
fur
Transcriptional regulator of Fe2+ uptake; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
 
 0.615
groEL
COG0459 Chaperonin GroEL (HSP60 family).
   
 
 0.601
EAQ31841.1
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
    
   0.595
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.