Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32535.1COG1611 Predicted Rossmann fold nucleotide-binding protein. (296 aa)    
Predicted Functional Partners:
EAQ32536.1
Hypothetical protein.
 
     0.808
EAQ32534.1
Hypothetical protein; COG3616 Predicted amino acid aldolase or racemase.
       0.773
EAQ31989.1
COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
  
    0.603
EAQ32537.1
Hypothetical protein; COG0693 Putative intracellular protease/amidase.
  
    0.478
EAQ31020.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
   
  0.476
EAQ30930.1
COG0207 Thymidylate synthase.
   
 
  0.462
mutT
7,8-dihydro-8-oxoguanine-triphosphatase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
 
  
  0.456
EAQ32538.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
    0.432
EAQ31391.1
COG0590 Cytosine/adenosine deaminases.
    
  0.409
EAQ30834.1
COG0524 Sugar kinases, ribokinase family.
    
  0.403
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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