Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EAQ32547.1Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. (157 aa)    
Predicted Functional Partners:
EAQ30851.1
COG2198 FOG: HPt domain.
     
 0.813
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
     
 0.813
EAQ32549.1
COG0845 Membrane-fusion protein.
       0.573
EAQ32551.1
Hypothetical protein.
       0.572
EAQ32548.1
Outer membrane protein.
       0.552
EAQ32550.1
Divalent cation exporter protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.551
recQ
COG0514 Superfamily II DNA helicase.
     
  0.439
EAQ31703.1
COG0642 Signal transduction histidine kinase.
     
  0.439
EAQ32552.1
Glyoxalase/dioxygenase superfamily protein; COG3324 Predicted enzyme related to lactoylglutathione lyase.
       0.437
EAQ31081.1
NifS; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
    
 
 0.421
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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