Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ32547.1 | EAQ32548.1 | OS145_08753 | OS145_08758 | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | Outer membrane protein. | 0.561 |
EAQ32547.1 | EAQ32549.1 | OS145_08753 | OS145_08763 | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | COG0845 Membrane-fusion protein. | 0.565 |
EAQ32547.1 | EAQ32550.1 | OS145_08753 | OS145_08768 | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | Divalent cation exporter protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.561 |
EAQ32547.1 | EAQ32551.1 | OS145_08753 | OS145_08773 | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.563 |
EAQ32547.1 | EAQ32552.1 | OS145_08753 | OS145_08778 | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | Glyoxalase/dioxygenase superfamily protein; COG3324 Predicted enzyme related to lactoylglutathione lyase. | 0.437 |
EAQ32548.1 | EAQ32547.1 | OS145_08758 | OS145_08753 | Outer membrane protein. | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | 0.561 |
EAQ32548.1 | EAQ32549.1 | OS145_08758 | OS145_08763 | Outer membrane protein. | COG0845 Membrane-fusion protein. | 0.807 |
EAQ32548.1 | EAQ32550.1 | OS145_08758 | OS145_08768 | Outer membrane protein. | Divalent cation exporter protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.807 |
EAQ32548.1 | EAQ32551.1 | OS145_08758 | OS145_08773 | Outer membrane protein. | Hypothetical protein. | 0.807 |
EAQ32548.1 | EAQ32552.1 | OS145_08758 | OS145_08778 | Outer membrane protein. | Glyoxalase/dioxygenase superfamily protein; COG3324 Predicted enzyme related to lactoylglutathione lyase. | 0.605 |
EAQ32548.1 | EAQ32553.1 | OS145_08758 | OS145_08783 | Outer membrane protein. | COG0760 Parvulin-like peptidyl-prolyl isomerase. | 0.485 |
EAQ32549.1 | EAQ32547.1 | OS145_08763 | OS145_08753 | COG0845 Membrane-fusion protein. | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | 0.565 |
EAQ32549.1 | EAQ32548.1 | OS145_08763 | OS145_08758 | COG0845 Membrane-fusion protein. | Outer membrane protein. | 0.807 |
EAQ32549.1 | EAQ32550.1 | OS145_08763 | OS145_08768 | COG0845 Membrane-fusion protein. | Divalent cation exporter protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.807 |
EAQ32549.1 | EAQ32551.1 | OS145_08763 | OS145_08773 | COG0845 Membrane-fusion protein. | Hypothetical protein. | 0.807 |
EAQ32549.1 | EAQ32552.1 | OS145_08763 | OS145_08778 | COG0845 Membrane-fusion protein. | Glyoxalase/dioxygenase superfamily protein; COG3324 Predicted enzyme related to lactoylglutathione lyase. | 0.605 |
EAQ32549.1 | EAQ32553.1 | OS145_08763 | OS145_08783 | COG0845 Membrane-fusion protein. | COG0760 Parvulin-like peptidyl-prolyl isomerase. | 0.485 |
EAQ32550.1 | EAQ32547.1 | OS145_08768 | OS145_08753 | Divalent cation exporter protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Membrane associated protein containing LuxR-like DNA-binding HTH domain; COG0477 Permeases of the major facilitator superfamily. | 0.561 |
EAQ32550.1 | EAQ32548.1 | OS145_08768 | OS145_08758 | Divalent cation exporter protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.807 |
EAQ32550.1 | EAQ32549.1 | OS145_08768 | OS145_08763 | Divalent cation exporter protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | COG0845 Membrane-fusion protein. | 0.807 |
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