Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ32576.1DNA-binding protein, putative; COG3311 Predicted transcriptional regulator. (76 aa)    
Predicted Functional Partners:
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
  0.925
EAQ32578.1
Site-specific recombinase, phage integrase family protein; COG0582 Integrase.
 
    0.836
EAQ32917.1
Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein.
  
     0.752
EAQ32932.1
COG0347 Nitrogen regulatory protein PII.
  
     0.720
EAQ32586.1
Uncharacterized protein, containing periplasmic binding domain.
  
     0.717
EAQ32944.1
COG1276 Putative copper export protein.
  
     0.715
EAQ31729.1
Hypothetical protein.
  
     0.707
EAQ32093.1
Uncharacterized secreted protein.
  
     0.677
EAQ32533.1
Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family).
  
     0.666
EAQ31045.1
Type IV pilus protein, PilN; COG1450 Type II secretory pathway, component PulD; Belongs to the bacterial secretin family.
  
     0.661
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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