Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ32587.1 | EAQ32588.1 | OS145_08953 | OS145_08958 | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | Cation transporter, CDF family protein; COG0053 Predicted Co/Zn/Cd cation transporters. | 0.738 |
EAQ32587.1 | EAQ33341.1 | OS145_08953 | OS145_03195 | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | COG0408 Coproporphyrinogen III oxidase. | 0.657 |
EAQ32587.1 | mnmC | OS145_08953 | OS145_12096 | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.500 |
EAQ32587.1 | rlmH | OS145_08953 | OS145_12490 | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.488 |
EAQ32587.1 | tig | OS145_08953 | OS145_12220 | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | Trigger factor; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor). | 0.426 |
EAQ32587.1 | trmB | OS145_08953 | OS145_03422 | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | Predicted methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.447 |
EAQ32588.1 | EAQ32587.1 | OS145_08958 | OS145_08953 | Cation transporter, CDF family protein; COG0053 Predicted Co/Zn/Cd cation transporters. | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | 0.738 |
EAQ33341.1 | EAQ32587.1 | OS145_03195 | OS145_08953 | COG0408 Coproporphyrinogen III oxidase. | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | 0.657 |
mnmC | EAQ32587.1 | OS145_12096 | OS145_08953 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | 0.500 |
rlmH | EAQ32587.1 | OS145_12490 | OS145_08953 | Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | 0.488 |
tig | EAQ32587.1 | OS145_12220 | OS145_08953 | Trigger factor; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor). | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | 0.426 |
trmB | EAQ32587.1 | OS145_03422 | OS145_08953 | Predicted methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Predicted rRNA/tRNA methylase, SpoU family protein; COG0219 Predicted rRNA methylase (SpoU class). | 0.447 |