Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ32622.1COG0527 Aspartokinases. (812 aa)    
Predicted Functional Partners:
EAQ31034.1
COG0136 Aspartate-semialdehyde dehydrogenase.
 
 0.999
EAQ32490.1
Aspartate kinase III; COG0527 Aspartokinases; Belongs to the aspartokinase family.
 
0.985
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 
 0.972
EAQ31642.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 0.953
EAQ33179.1
COG1171 Threonine dehydratase.
  
 0.948
EAQ33062.1
COG2021 Homoserine acetyltransferase.
  
 
 0.945
EAQ32972.1
COG0137 Argininosuccinate synthase.
  
 
 0.936
EAQ31450.1
COG0112 Glycine/serine hydroxymethyltransferase.
  
 
 0.923
EAQ31402.1
COG2873 O-acetylhomoserine sulfhydrylase.
  
 
 0.910
EAQ31658.1
COG0159 Tryptophan synthase alpha chain.
   
 
 0.909
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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