Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ31502.1DinP DNA polymerase-like protein; Involved in DNA repair; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. (471 aa)    
Predicted Functional Partners:
EAQ31503.1
SulA-like SOS-response cell division inhibitor.
 
  
 0.999
EAQ31501.1
COG0587 DNA polymerase III, alpha subunit.
 
  
 0.979
EAQ33361.1
DNA polymerase sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]
    
 0.842
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
 
 
 0.841
recA
COG0468 RecA/RadA recombinase.
  
 0.774
EAQ33338.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
 0.744
EAQ33137.1
SOS-response cell division inhibitor; COG0438 Glycosyltransferase.
  
  
 0.668
EAQ31504.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.639
EAQ31505.1
COG0668 Small-conductance mechanosensitive channel.
 
     0.594
EAQ32213.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
    
 
 0.540
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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