STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31555.1Putative ATPase involved in DNA repair; COG0840 Methyl-accepting chemotaxis protein. (971 aa)    
Predicted Functional Partners:
EAQ30851.1
COG2198 FOG: HPt domain.
   
  0.854
EAQ32646.1
Serine/threonine kinase with two-component sensor domain; COG2199 FOG: GGDEF domain.
  
 0.846
EAQ31669.1
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
 
 0.836
EAQ31399.1
COG0516 IMP dehydrogenase/GMP reductase.
   
  0.814
EAQ30963.1
COG0591 Na+/proline symporter.
   
  0.801
EAQ33057.1
PAS domain-containing protein; COG0591 Na+/proline symporter.
   
  0.801
EAQ32499.1
Hybrid sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
    
  0.799
EAQ32237.1
Putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
    
  0.782
EAQ31360.1
COG0840 Methyl-accepting chemotaxis protein.
    
  0.770
EAQ33238.1
COG0840 Methyl-accepting chemotaxis protein.
    
  0.760
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.