Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
ribDRiboflavin-specific deaminase/reductase; COG0117 Pyrimidine deaminase. (373 aa)    
Predicted Functional Partners:
EAQ32440.1
COG0307 Riboflavin synthase alpha chain.
 
 0.999
EAQ31453.1
COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
 0.999
ribH
Riboflavin synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.
 
 
 0.994
EAQ32073.1
Enolase; COG0148 Enolase.
   
   0.958
EAQ31451.1
COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains.
  
  
 0.938
EAQ32671.1
COG1011 Predicted hydrolase (HAD superfamily).
    
 0.934
EAQ31840.1
FlaG; COG1334 Uncharacterized flagellar protein FlaG.
   
   0.876
hisI
COG0139 Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
    
 0.837
EAQ32191.1
COG0439 Biotin carboxylase.
   
   0.826
EAQ32127.1
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
   
   0.826
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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