Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ31469.1 | EAQ31472.1 | OS145_10165 | OS145_10180 | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.766 |
| EAQ31469.1 | EAQ31474.1 | OS145_10165 | OS145_10190 | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family. | 0.654 |
| EAQ31469.1 | apt | OS145_10165 | OS145_10170 | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.853 |
| EAQ31469.1 | dnaX | OS145_10165 | OS145_10175 | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | DNA polymerase III, gamma/tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.823 |
| EAQ31469.1 | recR | OS145_10165 | OS145_10185 | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | Recombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.747 |
| EAQ31472.1 | EAQ31469.1 | OS145_10180 | OS145_10165 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | 0.766 |
| EAQ31472.1 | EAQ31474.1 | OS145_10180 | OS145_10190 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family. | 0.772 |
| EAQ31472.1 | apt | OS145_10180 | OS145_10170 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.778 |
| EAQ31472.1 | dnaX | OS145_10180 | OS145_10175 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III, gamma/tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.906 |
| EAQ31472.1 | recR | OS145_10180 | OS145_10185 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.995 |
| EAQ31474.1 | EAQ31469.1 | OS145_10190 | OS145_10165 | Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family. | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | 0.654 |
| EAQ31474.1 | EAQ31472.1 | OS145_10190 | OS145_10180 | Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.772 |
| EAQ31474.1 | apt | OS145_10190 | OS145_10170 | Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.559 |
| EAQ31474.1 | dnaX | OS145_10190 | OS145_10175 | Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family. | DNA polymerase III, gamma/tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.624 |
| EAQ31474.1 | recR | OS145_10190 | OS145_10185 | Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family. | Recombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.785 |
| EAQ33360.1 | recO | OS145_03290 | OS145_07384 | COG1195 Recombinational DNA repair ATPase (RecF pathway). | Recombinational DNA repair protein, RecO, RecF pathway; Involved in DNA repair and RecF pathway recombination. | 0.512 |
| EAQ33360.1 | recR | OS145_03290 | OS145_10185 | COG1195 Recombinational DNA repair ATPase (RecF pathway). | Recombinational DNA repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.752 |
| EAQ33360.1 | topA | OS145_03290 | OS145_12156 | COG1195 Recombinational DNA repair ATPase (RecF pathway). | COG0550 Topoisomerase IA; Belongs to the type IA topoisomerase family. | 0.478 |
| EAQ33360.1 | uvrC | OS145_03290 | OS145_06764 | COG1195 Recombinational DNA repair ATPase (RecF pathway). | COG0322 Nuclease subunit of the excinuclease complex. | 0.433 |
| apt | EAQ31469.1 | OS145_10170 | OS145_10165 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | 0.853 |
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