Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ30851.1 | EAQ30963.1 | OS145_00010 | OS145_00145 | COG2198 FOG: HPt domain. | COG0591 Na+/proline symporter. | 0.999 |
EAQ30851.1 | EAQ31396.1 | OS145_00010 | OS145_04725 | COG2198 FOG: HPt domain. | Periplasmic sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver. | 0.999 |
EAQ30851.1 | EAQ31681.1 | OS145_00010 | OS145_10590 | COG2198 FOG: HPt domain. | Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase. | 0.999 |
EAQ30851.1 | EAQ31693.1 | OS145_00010 | OS145_10650 | COG2198 FOG: HPt domain. | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | 0.999 |
EAQ30851.1 | EAQ31938.1 | OS145_00010 | OS145_11626 | COG2198 FOG: HPt domain. | Hypothetical protein; COG0784 FOG: CheY-like receiver. | 0.999 |
EAQ30851.1 | EAQ31939.1 | OS145_00010 | OS145_11631 | COG2198 FOG: HPt domain. | GGDEF domain protein; COG2203 FOG: GAF domain. | 0.999 |
EAQ30851.1 | EAQ31991.1 | OS145_00010 | OS145_06937 | COG2198 FOG: HPt domain. | Phytochrome sensor diguanylate cyclase/phosphodiesterase; COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase). | 0.998 |
EAQ30851.1 | EAQ32237.1 | OS145_00010 | OS145_08397 | COG2198 FOG: HPt domain. | Putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.999 |
EAQ30851.1 | EAQ32499.1 | OS145_00010 | OS145_00815 | COG2198 FOG: HPt domain. | Hybrid sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.999 |
EAQ30851.1 | EAQ33057.1 | OS145_00010 | OS145_04483 | COG2198 FOG: HPt domain. | PAS domain-containing protein; COG0591 Na+/proline symporter. | 0.999 |
EAQ30963.1 | EAQ30851.1 | OS145_00145 | OS145_00010 | COG0591 Na+/proline symporter. | COG2198 FOG: HPt domain. | 0.999 |
EAQ30963.1 | EAQ31396.1 | OS145_00145 | OS145_04725 | COG0591 Na+/proline symporter. | Periplasmic sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver. | 0.998 |
EAQ30963.1 | EAQ31681.1 | OS145_00145 | OS145_10590 | COG0591 Na+/proline symporter. | Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase. | 0.999 |
EAQ30963.1 | EAQ31693.1 | OS145_00145 | OS145_10650 | COG0591 Na+/proline symporter. | Chemotaxis protein CheY; COG0784 FOG: CheY-like receiver. | 0.998 |
EAQ30963.1 | EAQ31938.1 | OS145_00145 | OS145_11626 | COG0591 Na+/proline symporter. | Hypothetical protein; COG0784 FOG: CheY-like receiver. | 0.999 |
EAQ30963.1 | EAQ31939.1 | OS145_00145 | OS145_11631 | COG0591 Na+/proline symporter. | GGDEF domain protein; COG2203 FOG: GAF domain. | 0.999 |
EAQ30963.1 | EAQ31991.1 | OS145_00145 | OS145_06937 | COG0591 Na+/proline symporter. | Phytochrome sensor diguanylate cyclase/phosphodiesterase; COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase). | 0.997 |
EAQ30963.1 | EAQ32237.1 | OS145_00145 | OS145_08397 | COG0591 Na+/proline symporter. | Putative GGDEF domain membrane associated protein, putative nucleotide cyclase/phophodiesterase box; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. | 0.999 |
EAQ30963.1 | EAQ32499.1 | OS145_00145 | OS145_00815 | COG0591 Na+/proline symporter. | Hybrid sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.999 |
EAQ30963.1 | EAQ33057.1 | OS145_00145 | OS145_04483 | COG0591 Na+/proline symporter. | PAS domain-containing protein; COG0591 Na+/proline symporter. | 0.999 |
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