Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31875.1COG3114 Heme exporter protein D. (69 aa)    
Predicted Functional Partners:
EAQ31874.1
COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
 
 0.996
EAQ31876.1
COG2332 Cytochrome c-type biogenesis protein CcmE.
 
 
 0.996
EAQ31873.1
COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
 
 0.991
EAQ31872.1
COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component.
 
 
 
 0.988
EAQ31877.1
COG1138 Cytochrome c biogenesis factor.
 
  
 0.944
EAQ31878.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.920
EAQ31880.1
TPR-containg protein; COG4235 Cytochrome c biogenesis factor.
 
  
 0.906
EAQ31879.1
COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes.
 
  
 0.895
EAQ31881.1
COG2853 Surface lipoprotein.
     
 0.848
EAQ31055.1
Gliding motility protein (gldA) related protein; COG1131 ABC-type multidrug transport system, ATPase component.
   
 
 0.747
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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