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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31941.1Hypothetical protein; COG4566 Response regulator. (205 aa)    
Predicted Functional Partners:
EAQ33057.1
PAS domain-containing protein; COG0591 Na+/proline symporter.
 
 
 0.945
EAQ30851.1
COG2198 FOG: HPt domain.
   
 0.944
EAQ32499.1
Hybrid sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.942
EAQ30963.1
COG0591 Na+/proline symporter.
   
 0.937
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
 
 
 0.932
EAQ31939.1
GGDEF domain protein; COG2203 FOG: GAF domain.
   
 0.887
EAQ31848.1
Sensory box/GGDEF domain/EAL domain protein; COG2202 FOG: PAS/PAC domain.
 
 
 0.863
EAQ31938.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
 
 0.845
EAQ31964.1
Intracellular signaling protein (PAS,GAF,GGDEF domains); COG2199 FOG: GGDEF domain.
 
 
 0.834
EAQ31360.1
COG0840 Methyl-accepting chemotaxis protein.
    
  0.832
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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