Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
EAQ31045.1Type IV pilus protein, PilN; COG1450 Type II secretory pathway, component PulD; Belongs to the bacterial secretin family. (489 aa)    
Predicted Functional Partners:
EAQ31044.1
Hypothetical protein.
       0.834
EAQ31049.1
Hypothetical protein.
  
    0.797
gspC
COG3031 Type II secretory pathway, component PulC.
  
 
 0.781
EAQ31048.1
MSHA biogenesis protein MshE; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
  
 0.778
EAQ31046.1
Hypothetical protein.
       0.773
EAQ31050.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
  
 
  0.753
EAQ31052.1
Uncharacterized conserved membrane protein.
       0.731
EAQ31047.1
Hypothetical protein.
       0.723
EAQ31349.1
Pilin protein; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
 
  0.692
EAQ31359.1
Type II secretory pathway component; COG4972 Tfp pilus assembly protein, ATPase PilM.
 
  
 0.672
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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