STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32098.1COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family. (393 aa)    
Predicted Functional Partners:
EAQ32099.1
COG4962 Flp pilus assembly protein, ATPase CpaF.
  
 0.985
EAQ32100.1
COG4965 Flp pilus assembly protein TadB.
 
  
 0.969
EAQ32101.1
COG2064 Flp pilus assembly protein TadC.
 
  
 0.969
cpaB
Flp pilus assembly protein CpaB.
 
  
 0.966
EAQ32092.1
Flp/Fap pilin-like protein.
 
     0.870
EAQ32093.1
Uncharacterized secreted protein.
 
  
 0.869
EAQ32102.1
Hypothetical protein.
 
     0.859
EAQ32094.1
Hypothetical protein.
       0.776
EAQ32095.1
Hypothetical protein, IL_1 family protein; COG1876 D-alanyl-D-alanine carboxypeptidase.
       0.741
EAQ32096.1
Hypothetical protein.
       0.741
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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