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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32101.1COG2064 Flp pilus assembly protein TadC. (264 aa)    
Predicted Functional Partners:
EAQ32100.1
COG4965 Flp pilus assembly protein TadB.
 
  
 0.997
EAQ32099.1
COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.984
EAQ32098.1
COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.969
cpaB
Flp pilus assembly protein CpaB.
 
  
 0.964
EAQ32093.1
Uncharacterized secreted protein.
 
    0.901
EAQ32092.1
Flp/Fap pilin-like protein.
 
     0.884
EAQ32102.1
Hypothetical protein.
 
     0.879
EAQ32094.1
Hypothetical protein.
       0.769
EAQ32095.1
Hypothetical protein, IL_1 family protein; COG1876 D-alanyl-D-alanine carboxypeptidase.
       0.741
EAQ32096.1
Hypothetical protein.
       0.741
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.