Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ32122.1COG2916 DNA-binding protein H-NS; Belongs to the histone-like protein H-NS family. (137 aa)    
Predicted Functional Partners:
EAQ31303.1
Hypothetical protein.
  
     0.634
EAQ32121.1
Hypothetical protein; COG0470 ATPase involved in DNA replication.
       0.602
EAQ33178.1
COG3068 Uncharacterized protein conserved in bacteria.
  
     0.567
EAQ32157.1
SecY interacting protein Syd; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.
  
     0.554
proQ
Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
    0.534
EAQ33333.1
COG3078 Uncharacterized protein conserved in bacteria.
  
     0.529
EAQ30851.1
COG2198 FOG: HPt domain.
  
   
 0.513
EAQ31599.1
Pilin protein PilA; COG4969 Tfp pilus assembly protein, major pilin PilA.
  
     0.512
EAQ32123.1
Electron transfer flavoprotein-ubiquinone oxidoreductase, putative; Accepts electrons from ETF and reduces ubiquinone.
       0.501
EAQ32129.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
       0.501
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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