EAQ32145.1 protein (Idiomarina baltica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAQ32145.1

Wall associated protein; COG3209 Rhs family protein. (1489 aa)

Predicted Functional Partners:

EAQ31289.1

0.654

EAQ31338.1

0.654

EAQ32256.1

0.654

EAQ31258.1

0.629

EAQ31384.1

0.551

EAQ32144.1

0.531

EAQ32767.1

0.528

EAQ32762.1

0.466

EAQ32854.1

0.453

EAQ32585.1

0.421

Your Current Organism:

Idiomarina baltica

NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ31258.1	EAQ31384.1	OS145_03337	OS145_04665	General secretion pathway protein B.	Predicted extracellular metal-dependent peptidase; COG3291 FOG: PKD repeat.	0.709
EAQ31258.1	EAQ32145.1	OS145_03337	OS145_12979	General secretion pathway protein B.	Wall associated protein; COG3209 Rhs family protein.	0.629
EAQ31258.1	EAQ32767.1	OS145_03337	OS145_01372	General secretion pathway protein B.	Secreted subtilisin-like peptidase; COG1404 Subtilisin-like serine proteases.	0.659
EAQ31258.1	EAQ32854.1	OS145_03337	OS145_01807	General secretion pathway protein B.	Uncharacterized conserved secreted protein.	0.745
EAQ31289.1	EAQ32145.1	OS145_03492	OS145_12979	COG3118 Thioredoxin domain-containing protein.	Wall associated protein; COG3209 Rhs family protein.	0.654
EAQ31289.1	EAQ32256.1	OS145_03492	OS145_08492	COG3118 Thioredoxin domain-containing protein.	Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.	0.412
EAQ31338.1	EAQ32145.1	OS145_06392	OS145_12979	Thioredoxin related protein; COG0526 Thiol-disulfide isomerase and thioredoxins.	Wall associated protein; COG3209 Rhs family protein.	0.654
EAQ31384.1	EAQ31258.1	OS145_04665	OS145_03337	Predicted extracellular metal-dependent peptidase; COG3291 FOG: PKD repeat.	General secretion pathway protein B.	0.709
EAQ31384.1	EAQ32145.1	OS145_04665	OS145_12979	Predicted extracellular metal-dependent peptidase; COG3291 FOG: PKD repeat.	Wall associated protein; COG3209 Rhs family protein.	0.551
EAQ31384.1	EAQ32767.1	OS145_04665	OS145_01372	Predicted extracellular metal-dependent peptidase; COG3291 FOG: PKD repeat.	Secreted subtilisin-like peptidase; COG1404 Subtilisin-like serine proteases.	0.856
EAQ32144.1	EAQ32145.1	OS145_12974	OS145_12979	Hypothetical protein.	Wall associated protein; COG3209 Rhs family protein.	0.531
EAQ32145.1	EAQ31258.1	OS145_12979	OS145_03337	Wall associated protein; COG3209 Rhs family protein.	General secretion pathway protein B.	0.629
EAQ32145.1	EAQ31289.1	OS145_12979	OS145_03492	Wall associated protein; COG3209 Rhs family protein.	COG3118 Thioredoxin domain-containing protein.	0.654
EAQ32145.1	EAQ31338.1	OS145_12979	OS145_06392	Wall associated protein; COG3209 Rhs family protein.	Thioredoxin related protein; COG0526 Thiol-disulfide isomerase and thioredoxins.	0.654
EAQ32145.1	EAQ31384.1	OS145_12979	OS145_04665	Wall associated protein; COG3209 Rhs family protein.	Predicted extracellular metal-dependent peptidase; COG3291 FOG: PKD repeat.	0.551
EAQ32145.1	EAQ32144.1	OS145_12979	OS145_12974	Wall associated protein; COG3209 Rhs family protein.	Hypothetical protein.	0.531
EAQ32145.1	EAQ32256.1	OS145_12979	OS145_08492	Wall associated protein; COG3209 Rhs family protein.	Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.	0.654
EAQ32145.1	EAQ32585.1	OS145_12979	OS145_08943	Wall associated protein; COG3209 Rhs family protein.	Secreted protein related to cyanophycinase CphE; COG4242 Cyanophycinase and related exopeptidases.	0.421
EAQ32145.1	EAQ32762.1	OS145_12979	OS145_01347	Wall associated protein; COG3209 Rhs family protein.	COG0842 ABC-type multidrug transport system, permease component.	0.466
EAQ32145.1	EAQ32767.1	OS145_12979	OS145_01372	Wall associated protein; COG3209 Rhs family protein.	Secreted subtilisin-like peptidase; COG1404 Subtilisin-like serine proteases.	0.528