STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32145.1Wall associated protein; COG3209 Rhs family protein. (1489 aa)    
Predicted Functional Partners:
EAQ31258.1
General secretion pathway protein B.
  
 
 0.652
EAQ31384.1
Predicted extracellular metal-dependent peptidase; COG3291 FOG: PKD repeat.
 
 
 0.550
EAQ32767.1
Secreted subtilisin-like peptidase; COG1404 Subtilisin-like serine proteases.
 
  
 0.535
EAQ32144.1
Hypothetical protein.
       0.531
EAQ32762.1
COG0842 ABC-type multidrug transport system, permease component.
  
     0.466
EAQ32474.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
 
 0.465
EAQ31555.1
Putative ATPase involved in DNA repair; COG0840 Methyl-accepting chemotaxis protein.
  
 
 0.465
EAQ31711.1
COG1196 Chromosome segregation ATPases.
  
 
 0.465
EAQ30801.1
COG1196 Chromosome segregation ATPases.
  
 
 0.465
EAQ32854.1
Uncharacterized conserved secreted protein.
  
 
 0.452
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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