STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63671.1Hypothetical protein; COG4989 Predicted oxidoreductase. (300 aa)    
Predicted Functional Partners:
EAQ63673.1
Putative oxidoreductase myo-inositol 2-dehydrogena; COG0673 Predicted dehydrogenases and related proteins.
 
     0.766
EAQ63672.1
Hypothetical protein; COG2188 Transcriptional regulators.
 
    0.747
EAQ63670.1
Putative membrane protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.671
EAQ63668.1
TRAP dicarboxylate transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.640
EAQ63669.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
     0.524
EAQ64982.1
COG1874 Beta-galactosidase.
 
     0.483
EAQ64988.1
COG3345 Alpha-galactosidase.
 
     0.454
EAQ63404.1
Putative pyruvate dehydrogenase E1 component,alpha and beta subunits protein; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
   
    0.414
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.