STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63672.1Hypothetical protein; COG2188 Transcriptional regulators. (239 aa)    
Predicted Functional Partners:
EAQ63673.1
Putative oxidoreductase myo-inositol 2-dehydrogena; COG0673 Predicted dehydrogenases and related proteins.
 
    0.890
EAQ63671.1
Hypothetical protein; COG4989 Predicted oxidoreductase.
 
    0.747
EAQ63668.1
TRAP dicarboxylate transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.681
EAQ63670.1
Putative membrane protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.638
pdhR
Transcriptional regulator of pyruvate dehydrogenase complex; COG2186 Transcriptional regulators.
  
  
 0.638
EAQ64684.1
Putative transcriptional regulatory protein; COG1940 Transcriptional regulator/sugar kinase.
 
 
 0.587
EAQ65828.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.500
EAQ66026.1
Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
 0.482
EAQ65323.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
 0.482
EAQ64669.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
  
 0.475
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.