STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65822.1Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family. (973 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
 0.999
EAQ65821.1
Putative sarcosine oxidase gamma subunit protein (SoxG); COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
 0.996
EAQ65823.1
COG4311 Sarcosine oxidase delta subunit.
 
 0.996
EAQ65824.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 0.995
EAQ63846.1
COG4311 Sarcosine oxidase delta subunit.
 0.992
EAQ63844.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.989
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.985
EAQ63847.1
Sarcosine oxidase, beta subunit; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.985
EAQ64322.1
Glutamine amidotransferase, class-II; COG0069 Glutamate synthase domain 2.
    
 0.974
EAQ63116.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
    
 0.974
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.