STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65895.1COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; Belongs to the UPF0149 family. (217 aa)    
Predicted Functional Partners:
EAQ67536.1
Hypothetical protein.
  
     0.770
EAQ65049.1
Hypothetical protein; COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.656
EAQ63769.1
Integration host factor beta subunit.
  
     0.655
EAQ67487.1
Hypothetical protein.
  
     0.655
EAQ63705.1
Nucleoid-associated protein, putative; COG3081 Nucleoid-associated protein.
  
     0.606
EAQ67271.1
COG3255 Putative sterol carrier protein.
  
     0.597
EAQ65893.1
Putative SprT protein; COG3091 Uncharacterized protein conserved in bacteria; Belongs to the SprT family.
       0.587
EAQ65894.1
COG0514 Superfamily II DNA helicase.
       0.579
EAQ65418.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.556
EAQ66672.1
COG3139 Uncharacterized protein conserved in bacteria.
  
     0.553
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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