STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65902.1Cobalamin (vitamin B12) biosynthesis CbiX protein. (124 aa)    
Predicted Functional Partners:
EAQ63809.1
Uroporphyrin-III C-methyltransferase, C-terminal:Siroheme synthase,N-terminal; COG0007 Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
  
 
 0.993
EAQ67354.1
COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
    
 0.937
EAQ67355.1
precorrin-6Y C5,15-methyltransferase (decarboxylating); COG2241 Precorrin-6B methylase 1.
    
 0.893
EAQ65899.1
COG4913 Uncharacterized protein conserved in bacteria.
       0.615
EAQ65900.1
Hypothetical protein.
       0.615
EAQ65901.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.615
EAQ67301.1
uroporphyrinogen-III synthetase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
 
 0.560
EAQ65890.1
Hypothetical protein.
  
     0.557
EAQ67359.1
COG1797 Cobyrinic acid a,c-diamide synthase.
    
 0.557
EAQ67353.1
COG2073 Cobalamin biosynthesis protein CbiG.
    
 0.554
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.