STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ65986.1COG3941 Mu-like prophage protein. (601 aa)    
Predicted Functional Partners:
EAQ65993.1
Prophage MuSo2, tail fiber protein, putative.
 
  
 0.991
EAQ65987.1
COG4228 Mu-like prophage DNA circulation protein.
 
     0.944
EAQ65988.1
Prophage MuSo2, 43 kDa tail protein, putative; COG4379 Mu-like prophage tail protein gpP.
 
     0.943
EAQ65989.1
Prophage MuSo2, baseplate assembly protein V; COG4384 Mu-like prophage protein gp45.
 
     0.943
EAQ65990.1
COG4381 Mu-like prophage protein gp46.
 
     0.942
EAQ65992.1
COG3778 Uncharacterized protein conserved in bacteria.
 
     0.940
EAQ65991.1
Hypothetical protein; COG3299 Uncharacterized homolog of phage Mu protein gp47.
 
     0.939
EAQ65977.1
COG4397 Mu-like prophage major head subunit gpT.
 
  
 0.885
EAQ65983.1
COG4386 Mu-like prophage tail sheath protein gpL.
 
     0.884
EAQ65979.1
COG4387 Mu-like prophage protein gp36.
 
     0.881
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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