STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63331.1COG3795 Uncharacterized protein conserved in bacteria. (138 aa)    
Predicted Functional Partners:
EAQ63330.1
Putative sigma factor; COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family.
 
     0.933
EAQ64432.1
Hypothetical protein.
 
     0.631
EAQ64431.1
Hypothetical protein; COG0640 Predicted transcriptional regulators.
 
     0.538
EAQ66789.1
Hypothetical protein.
  
     0.505
EAQ63332.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.463
EAQ66094.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.419
EAQ63329.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
       0.403
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.