STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ63734.1COG2081 Predicted flavoproteins. (376 aa)    
Predicted Functional Partners:
EAQ65014.1
Putative photolyase; COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
   
    0.422
EAQ66090.1
Hypothetical protein; COG3324 Predicted enzyme related to lactoylglutathione lyase.
  
    0.420
EAQ66874.1
Hypothetical protein; COG3324 Predicted enzyme related to lactoylglutathione lyase.
  
    0.420
EAQ64298.1
Putative enzyme protein; COG3324 Predicted enzyme related to lactoylglutathione lyase.
  
    0.420
EAQ64026.1
Hypothetical protein.
  
    0.420
EAQ65757.1
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
    0.418
EAQ66068.1
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
   
    0.410
EAQ64125.1
Hypothetical protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
   
    0.405
Your Current Organism:
Marinomonas sp. MED121
NCBI taxonomy Id: 314277
Other names: M. sp. MED121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.